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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115194410N-acetylaspartate synthetase-like. (282 aa)    
Predicted Functional Partners:
asns
Asparagine synthetase (glutamine-hydrolyzing).
     
 0.957
cad
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
   
 
  0.947
nat8l
N-acetyltransferase 8 like.
  
  
 
0.947
ENSSTUP00000090387
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
   
 
  0.947
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
 0.946
LOC115199822
N-alpha-acetyltransferase 35, NatC auxiliary subunit-like.
   
 0.946
LOC115166047
Beta-citrylglutamate synthase B-like.
     
 0.902
RIMKLA
Beta-citrylglutamate synthase B-like.
     
 0.902
ENSSTUP00000039430
Aspartoacylase.
   
 
 0.898
ENSSTUP00000002492
annotation not available
  
  
 
0.864
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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