STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115152964Rho GTPase-activating protein 22-like. (696 aa)    
Predicted Functional Partners:
LOC115150972
Macrophage-stimulating protein receptor-like.
    
  0.732
LOC115207569
Macrophage-stimulating protein receptor-like.
    
  0.732
LOC115152322
Hepatocyte growth factor receptor-like.
    
  0.732
ENSSTUP00000051999
Macrophage stimulating 1 receptor a.
    
  0.732
LOC115150855
Macrophage-stimulating protein receptor-like.
    
  0.732
LOC115197549
Hepatocyte growth factor receptor-like.
    
  0.732
LOC115150657
Cell division control protein 42 homolog.
    
 0.685
ENSSTUP00000047803
annotation not available
    
 0.685
LOC115165776
Cell division control protein 42 homolog.
    
 0.685
CDC42
Cell division control protein 42 homolog.
    
 0.685
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.