STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012797Synaptotagmin Va. (305 aa)    
Predicted Functional Partners:
STON2
Stonin 2.
   
 0.732
ENSSTUP00000053905
annotation not available
     
 0.717
ENSSTUP00000070599
Intersectin 2b.
     
 0.717
ENSSTUP00000041613
annotation not available
     
0.687
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.687
LOC115162035
Synaptosomal-associated protein 23-like.
   
 0.656
snap23
Synaptosome associated protein 23.
   
 0.656
ENSSTUP00000040064
Intersectin 1 (SH3 domain protein).
     
 0.609
ENSSTUP00000091247
Intersectin 1 (SH3 domain protein).
     
 0.609
LOC115170569
Ras-related protein Rab-3D-like.
   
 0.601
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.