Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc65Coiled-coil domain containing 65. (495 aa)    
Predicted Functional Partners:
drc1
Dynein regulatory complex subunit 1.
  
 0.977
cfap161
Cilia and flagella associated protein 161.
   
 
 0.954
dnai1
Dynein axonemal intermediate chain 1.
   
 0.952
RSPH1
Radial spoke head component 1.
   
 
 0.942
CCDC39
Coiled-coil domain containing 39.
   
 
 0.941
ENSSTUP00000014078
Dynein, axonemal, intermediate chain 2b.
   
 0.934
ENSSTUP00000100335
Dynein, axonemal, intermediate chain 2b.
   
 0.934
wdr78
WD repeat domain 78.
   
 0.932
rsph14
Radial spoke head 14 homolog.
   
 
 0.931
rsph9
Radial spoke head component 9.
   
 
 0.930
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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