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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115150567Zinc finger protein Eos-like. (556 aa)    
Predicted Functional Partners:
ENSSTUP00000007422
annotation not available
    
 
 0.728
crbn
Cereblon.
    
 
 0.728
LOC115202851
DNA damage-binding protein 1.
    
 0.659
LOC115167557
DNA damage-binding protein 1-like.
    
 0.659
ENSSTUP00000023803
Adenylate kinase 9.
    
  0.594
LOC115168062
Double-strand-break repair protein rad21 homolog.
    
 0.573
RAD21
RAD21 cohesin complex component.
    
 0.573
LOC115187877
Double-strand-break repair protein rad21 homolog A-like.
    
 0.573
LOC115187876
Double-strand-break repair protein rad21 homolog A-like.
    
 0.573
LOC115173411
Double-strand-break repair protein rad21 homolog A-like.
    
 0.573
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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