Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012909Si:ch211-197g15.10. (475 aa)    
Predicted Functional Partners:
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.959
LOC115172835
Radical S-adenosyl methionine domain-containing protein 2-like.
   
  
 0.959
ENSSTUP00000084341
Epithelial stromal interaction 1.
   
  
 0.930
ifih1
Interferon induced with helicase C domain 1.
   
  
 0.906
LOC115175801
Interferon-induced protein 44-like.
   
    0.837
LOC115179677
Interferon-induced protein 44-like.
   
    0.837
ENSSTUP00000088449
annotation not available
   
    0.837
LOC115196191
Interferon-induced protein 44-like.
   
    0.837
LOC115207663
Interferon-induced GTP-binding protein Mx1.
   
  
 0.836
LOC115171475
Interferon-induced 35 kDa protein homolog.
   
  
 0.830
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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