STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012909Si:ch211-197g15.10. (475 aa)    
Predicted Functional Partners:
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.982
LOC115172835
Radical S-adenosyl methionine domain-containing protein 2-like.
   
  
 0.982
ENSSTUP00000088449
annotation not available
  
  
0.958
LOC115175801
Interferon-induced protein 44-like.
  
  
0.955
LOC115179677
Interferon-induced protein 44-like.
  
  
0.955
LOC115196191
Interferon-induced protein 44-like.
  
  
0.955
ENSSTUP00000084341
Epithelial stromal interaction 1.
   
  
 0.926
LOC115169859
UBX domain-containing protein 7-like.
    
   0.900
LOC115156844
UBX domain-containing protein 7-like.
    
   0.900
ifih1
Interferon induced with helicase C domain 1.
   
  
 0.888
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.