Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115165652Transcription factor CP2-like. (520 aa)    
Predicted Functional Partners:
LOC115192533
Ankyrin repeat domain-containing protein 29-like.
    
   0.674
ANKRD29
Ankyrin repeat domain-containing protein 29.
    
   0.674
ENSSTUP00000008375
annotation not available
    
 
 0.618
ESRRB
Steroid hormone receptor ERR2-like.
    
 
 0.618
ESRRB-2
Steroid hormone receptor ERR2.
    
 
 0.618
LOC115175154
Steroid hormone receptor ERR2-like.
    
 
 0.618
ENSSTUP00000108585
Estrogen-related receptor gamma a.
    
 
 0.618
ENSSTUP00000004863
Protein arginine methyltransferase 6.
    
   0.594
ENSSTUP00000046325
Protein arginine methyltransferase 6.
    
   0.594
ENSSTUP00000015486
Ring finger protein 2.
    
   0.572
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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