Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000012948annotation not available (853 aa)    
Predicted Functional Partners:
ND3
NADH dehydrogenase subunit 3.
   
 0.925
ND1
NADH dehydrogenase subunit 1.
    
 0.923
ND4
NADH dehydrogenase subunit 4.
   
 0.922
ND2
NADH dehydrogenase subunit 2.
   
 0.921
ND5
NADH dehydrogenase subunit 5.
   
 0.921
ENSSTUP00000002569
annotation not available
    
 0.823
LOC115177176
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like.
    
 0.823
LOC115173260
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like.
    
 0.823
ENSSTUP00000020935
NADH:ubiquinone oxidoreductase core subunit S7.
    
 0.815
ENSSTUP00000024385
NADH:ubiquinone oxidoreductase core subunit S7.
    
 0.815
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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