Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC115170128Mitochondrial fission factor homolog A-like. (298 aa)    
Predicted Functional Partners:
DNM1L
Dynamin-1-like protein.
    
 
 0.841
ENSSTUP00000060903
Si:dkey-32e23.4.
    
 
 0.841
LOC115152369
Dynamin-1-like protein.
    
 
 0.841
ENSSTUP00000107780
annotation not available
    
 
 0.841
ENSSTUP00000115718
Si:dkey-32e23.4.
    
 
 0.841
LOC115197617
dnaJ homolog subfamily B member 9-like.
    
 
 0.841
ENSSTUP00000053906
annotation not available
      
 0.670
LOC115205088
LIM and calponin homology domains-containing protein 1-like.
    
 0.663
ENSSTUP00000053013
annotation not available
    
 0.663
mfn2
Mitofusin 2.
    
 
 0.635
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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