Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115202859Gamma-butyrobetaine dioxygenase-like. (456 aa)    
Predicted Functional Partners:
LOC115157269
Aldehyde dehydrogenase family 9 member A1-B-like.
  
 0.939
aldh9a1
Aldehyde dehydrogenase 9 family member A1.
  
 0.939
aldh16a1
Aldehyde dehydrogenase 16 family member A1.
  
 0.913
ENSSTUP00000016633
annotation not available
  
 0.899
LOC115176642
Aldehyde dehydrogenase, mitochondrial-like.
  
 0.899
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
  
 0.897
LOC115154983
Fatty aldehyde dehydrogenase-like.
  
 0.889
LOC115163804
Fatty aldehyde dehydrogenase-like.
  
 0.889
tmlhe
Trimethyllysine hydroxylase, epsilon.
   
 
 0.834
LOC115154641
Trimethyllysine dioxygenase, mitochondrial-like.
   
 
 0.834
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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