STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115205661Thymosin beta-a-like. (47 aa)    
Predicted Functional Partners:
LOC115151526
Actin-like protein 6A.
    
 0.591
ENSSTUP00000063476
Actin-like 6A.
    
 0.591
nphp1
Nephrocystin 1.
    
 0.584
LOC115171827
Actin, non-muscle 6.2.
    
 0.584
LOC115152854
Actin, alpha skeletal muscle 2-like.
    
 0.584
ENSSTUP00000005419
annotation not available
    
 0.584
ACTL7A
Actin-3-like.
    
 0.584
LOC115194398
Embryonal Fyn-associated substrate-like.
    
 0.584
ACTR10
Actin-related protein 10-like.
    
 0.584
ACTR1A
Beta-centractin-like.
    
 0.584
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.