STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115171410Xylosyltransferase 2-like. (877 aa)    
Predicted Functional Partners:
b4galt7
Beta-1,4-galactosyltransferase 7.
     
 0.924
LOC115205710
Beta-1,4-galactosyltransferase 7-like.
     
 0.924
LOC115175042
Syndecan-1-like.
    
 0.886
LOC115147275
Xylosyltransferase 1-like.
  
  
 
0.858
LOC115177878
Xylosyltransferase 1-like.
  
  
 
0.858
ENSSTUP00000045941
Xylosyltransferase I.
  
  
 
0.857
LOC115181500
Xylosyltransferase 1-like.
  
  
 
0.855
ENSSTUP00000056988
annotation not available
  
  
 
0.771
LOC115185345
Syndecan-2-like.
    
 0.672
LOC115176923
Syndecan-2-like.
    
 0.672
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (12%) [HD]