STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115191815Polypeptide N-acetylgalactosaminyltransferase-like 6. (602 aa)    
Predicted Functional Partners:
LOC115165492
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like.
     
 0.828
LOC115167833
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like.
     
 0.828
LOC115205070
C1GALT1-specific chaperone 1-like.
     
 0.827
LOC115170090
C1GALT1-specific chaperone 1-like.
     
 0.827
ENSSTUP00000099893
Si:dkey-202e17.1.
     
 0.790
LOC115171528
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.
     
 0.742
ENSSTUP00000103154
annotation not available
     
 0.727
ENSSTUP00000103261
Si:dkey-202e17.1.
     
 0.727
ENSSTUP00000063105
annotation not available
     
 0.724
LOC115201660
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like.
     
 0.724
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.