STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115208054Solute carrier family 26 member 6-like. (843 aa)    
Predicted Functional Partners:
mre11
MRE11 homolog, double strand break repair nuclease.
  
   0.818
ND4
NADH dehydrogenase subunit 4.
  
 
 0.817
LOC115167119
Leucine-rich repeat-containing G-protein coupled receptor 4-like.
     
 0.708
ENSSTUP00000040776
Relaxin family peptide receptor 1.
     
 0.708
ENSSTUP00000066458
annotation not available
     
 0.708
rxfp1
Relaxin family peptide receptor 1.
     
 0.708
LOC115203215
Leucine-rich repeat-containing G-protein coupled receptor 4-like.
     
 0.708
ENSSTUP00000079903
annotation not available
     
 0.708
ENSSTUP00000080497
annotation not available
     
 0.708
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
     
 0.708
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.