STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000023646CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b. (530 aa)    
Predicted Functional Partners:
gtf2f1
General transcription factor IIF subunit 1.
   
 0.892
ENSSTUP00000078224
General transcription factor IIF, polypeptide 1.
   
 0.892
LOC115166705
DNA-directed RNA polymerase II subunit RPB7-like.
    
 0.825
LOC115205758
DNA-directed RNA polymerase II subunit RPB7.
    
 0.825
ENSSTUP00000010467
Translocase of inner mitochondrial membrane 23 homolog a (yeast).
    
 0.813
ENSSTUP00000035398
Translocase of inner mitochondrial membrane 23 homolog b (yeast).
    
 0.813
LOC115201219
Mitochondrial import inner membrane translocase subunit Tim23.
    
 0.813
LOC115195372
Mitochondrial import inner membrane translocase subunit Tim21-like.
    
 0.789
timm21
Translocase of inner mitochondrial membrane 21.
    
 0.789
LOC115163296
DNA-directed RNA polymerase II subunit RPB4.
    
 0.774
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.