STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115168043Oxysterol-binding protein-related protein 2-like. (466 aa)    
Predicted Functional Partners:
LOC115203908
Ras-related protein Rab-7a-like.
    
 0.827
LOC115207860
Ras-related protein rab7-like.
    
 0.827
LOC115150796
Ras-related protein rab7-like.
    
 0.827
LOC115200108
Ras-related protein Rab-7a-like.
    
 0.827
LOC115150549
Ras-related protein rab7-like.
    
 0.827
RAB7A
Ras-related protein rab7.
    
 0.827
LOC115159759
Ras-related protein rab7-like.
    
 0.827
LOC115161120
Motile sperm domain-containing protein 2-like.
    
 
 0.779
LOC115155785
Motile sperm domain-containing protein 2-like.
    
 
 0.779
ENSSTUP00000051991
Rab interacting lysosomal protein.
   
 0.735
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.