STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000026713annotation not available (338 aa)    
Predicted Functional Partners:
ENSSTUP00000012541
annotation not available
   
 0.646
wdr90
WD repeat domain 90.
    
  0.626
ENSSTUP00000088458
Cyclin G associated kinase.
   
  0.597
ENSSTUP00000079615
Baculoviral IAP repeat containing 6.
   
  0.586
ift52
Intraflagellar transport 52.
    
 0.575
ift57
Intraflagellar transport 57.
    
 0.570
eci2
enoyl-CoA delta isomerase 2.
    
  0.568
LOC115195859
enoyl-CoA delta isomerase 2, mitochondrial-like.
    
  0.568
katnal2
Katanin catalytic subunit A1 like 2.
   
  0.568
ENSSTUP00000018315
Intraflagellar transport 172.
    
 0.553
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.