STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amn1Antagonist of mitotic exit network 1 homolog. (249 aa)    
Predicted Functional Partners:
ENSSTUP00000006246
S-phase kinase-associated protein 1.
   
 0.858
ENSSTUP00000006263
annotation not available
   
 0.858
ENSSTUP00000056505
S-phase kinase-associated protein 1.
   
 0.858
ENSSTUP00000048643
annotation not available
    
 0.743
RBX1
Ring-box 1.
    
 0.743
ENSSTUP00000068028
annotation not available
    
 0.743
LOC115171287
RING-box protein 1.
    
 0.743
ELOC
elongin-C.
    
 0.743
LOC115169709
Cullin-1.
    
 0.716
LOC115153000
CDK2-associated and cullin domain-containing protein 1-like.
    
 0.716
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.