STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000029250annotation not available (1380 aa)    
Predicted Functional Partners:
LOC115155678
Non-structural maintenance of chromosomes element 4 homolog A-like.
   
 0.954
LOC115198672
Non-structural maintenance of chromosomes element 1 homolog.
    
 0.899
LOC115171182
Non-structural maintenance of chromosomes element 1 homolog.
    
 0.899
LOC115161981
Structural maintenance of chromosomes protein 6-like.
    
 0.889
smc6
Structural maintenance of chromosomes 6.
    
 0.889
ENSSTUP00000029011
annotation not available
    
 0.888
ENSSTUP00000082861
Structural maintenance of chromosomes 5.
    
 0.888
ENSSTUP00000058592
annotation not available
    
 0.887
ENSSTUP00000058793
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.887
ENSSTUP00000081654
Structural maintenance of chromosomes 3.
    
 0.738
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.