STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115156910Potassium voltage-gated channel subfamily G member 3-like. (415 aa)    
Predicted Functional Partners:
ENSSTUP00000001683
annotation not available
   
  0.964
LOC115169781
Ubiquitin-like protein FUBI.
   
  0.964
ENSSTUP00000060436
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.964
ENSSTUP00000077803
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
  0.964
rpl23a
60S ribosomal protein L23a.
  
 0.861
rpl23a-2
60S ribosomal protein L23a.
  
 0.861
LOC115155900
60S ribosomal protein L24-like.
  
 0.857
LOC115161294
60S ribosomal protein L24.
  
 0.857
ENSSTUP00000019070
annotation not available
   
 0.856
LOC115149974
60S ribosomal protein L29-like.
   
 0.856
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.