STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115156439KATNB1-like protein 1. (312 aa)    
Predicted Functional Partners:
katnal2
Katanin catalytic subunit A1 like 2.
   
 
 0.800
LOC115202839
Katanin p80 WD40 repeat-containing subunit B1-like.
    
 
 0.758
KATNB1
Katanin p80 WD40 repeat-containing subunit B1-like.
    
 
 0.758
KATNA1
Katanin catalytic subunit A1.
   
 
 0.703
katna1
Katanin catalytic subunit A1.
   
 
 0.703
KATNAL1
Katanin p60 ATPase-containing subunit A-like 1.
   
 
 0.703
zzef1
Zinc finger ZZ-type and EF-hand domain containing 1.
      
 0.540
ENSSTUP00000018315
Intraflagellar transport 172.
      
 0.461
LOC115195372
Mitochondrial import inner membrane translocase subunit Tim21-like.
      
 0.410
timm21
Translocase of inner mitochondrial membrane 21.
      
 0.410
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.