STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115174453A-kinase anchor protein 12-like. (1638 aa)    
Predicted Functional Partners:
LOC115193841
Heat shock 70 kDa protein 12A-like.
    
 
 0.724
LOC115153157
Heat shock 70 kDa protein 12A-like.
    
 
 0.724
LOC115149176
Rho-related GTP-binding protein RhoF-like.
    
  0.667
LOC115159412
Rho-related GTP-binding protein RhoF-like.
    
  0.667
basp1
Brain abundant membrane attached signal protein 1.
     
 0.660
LOC115207787
F-actin-capping protein subunit beta isoforms 1 and 2.
     
 0.638
LOC115150626
F-actin-capping protein subunit beta isoforms 1 and 2-like.
     
 0.638
LOC115198030
Caveolae-associated protein 1-like.
   
  
 0.618
cavin1
Caveolae associated protein 1.
   
  
 0.618
LOC115171118
Caveolae-associated protein 1-like.
   
  
 0.618
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.