STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000041072annotation not available (725 aa)    
Predicted Functional Partners:
ENSSTUP00000019053
annotation not available
    
  0.543
ENSSTUP00000026397
Tenascin C.
    
  0.543
LOC115203962
Tenascin-like.
    
  0.543
ENSSTUP00000037385
Tenascin N.
    
  0.543
tnr
Tenascin R.
    
  0.543
ENSSTUP00000072820
annotation not available
    
  0.543
LOC115156994
tenascin-R-like.
    
  0.543
ENSSTUP00000081022
annotation not available
    
  0.543
LOC115156996
tenascin-N-like.
    
  0.543
LOC115177505
Tenascin-like.
    
  0.543
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.