STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115156599Snaclec B2-like. (167 aa)    
Predicted Functional Partners:
LOC115188344
CD209 antigen-like protein A.
    
 0.650
LOC115176533
C-type lectin domain family 10 member A-like.
    
 0.650
LOC115159484
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like.
    
 
 0.583
LOC115204154
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like.
    
 
 0.583
LOC115182697
TYRO protein tyrosine kinase-binding protein-like.
    
 0.552
LOC115177431
TYRO protein tyrosine kinase-binding protein-like.
    
 0.552
LOC115175916
Class I histocompatibility antigen, F10 alpha chain-like.
    
  0.552
ENSSTUP00000052281
annotation not available
    
  0.552
LOC115175905
Major histocompatibility complex class I-related gene protein-like.
    
  0.552
ENSSTUP00000074691
annotation not available
    
  0.552
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.