STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115194451Protein inturned-like. (976 aa)    
Predicted Functional Partners:
ENSSTUP00000002048
Anaphase promoting complex subunit 10.
    
 0.984
LOC115153320
Anaphase-promoting complex subunit 1-like.
    
 0.984
LOC115198132
Mitotic spindle assembly checkpoint protein MAD2A-like.
   
 0.977
LOC115194121
Mitotic spindle assembly checkpoint protein MAD2A-like.
   
 0.977
LOC115205058
Securin-like.
   
 0.974
LOC115164667
Anaphase-promoting complex subunit 7-like.
    
 0.967
bub3
BUB3 mitotic checkpoint protein.
   
 0.966
bub3-2
Mitotic checkpoint protein BUB3-like.
   
 0.966
LOC115205091
cyclin-A2-like.
   
 0.963
LOC115196412
Cell division cycle protein 27 homolog.
  
 0.963
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.