STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115164822Ubiquitin-associated protein 2-like. (1121 aa)    
Predicted Functional Partners:
mtor
Mechanistic target of rapamycin kinase.
    
   0.898
LOC115173785
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial-like.
  
 0.852
ENSSTUP00000050650
annotation not available
    
 
 0.845
rptor
Regulatory associated protein of MTOR complex 1.
    
 
 0.845
MCAT
malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like.
  
 0.792
MCAT-2
malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like.
  
 0.792
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.770
ENSSTUP00000000158
Cytochrome b5 reductase 4.
  
 0.756
CYB5R4
Cytochrome b5 reductase 4-like.
  
 0.756
eci2
enoyl-CoA delta isomerase 2.
  
 0.749
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.