STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000047817annotation not available (408 aa)    
Predicted Functional Partners:
ENSSTUP00000020757
annotation not available
  
 0.748
ENSSTUP00000021799
Sarcosine dehydrogenase.
  
 0.748
ENSSTUP00000077992
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.748
ENSSTUP00000078396
Aminomethyltransferase.
  
 0.748
LOC115168309
Aminomethyltransferase, mitochondrial-like.
  
 0.748
LOC115159734
Dimethylglycine dehydrogenase, mitochondrial-like.
  
 0.748
ENSSTUP00000116505
annotation not available
  
 0.748
ENSSTUP00000015179
annotation not available
    
  0.719
ENSSTUP00000088740
annotation not available
    
  0.719
LOC115206511
Uncharacterized LOC115206511.
    
  0.719
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.