STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115170100Chloride intracellular channel protein 2-like. (245 aa)    
Predicted Functional Partners:
gsr
Glutathione-disulfide reductase.
     
 0.776
gsto1
Glutathione S-transferase omega 1.
     
 0.745
LOC115180663
valine--tRNA ligase-like.
     
 0.713
LOC115176377
valine--tRNA ligase-like.
     
 0.713
ENSSTUP00000073874
annotation not available
    
 0.708
ENSSTUP00000107713
annotation not available
    
 0.708
LOC115148422
Gametogenetin-binding protein 2-like.
     
 0.590
ggnbp2
Gametogenetin binding protein 2.
     
 0.590
LOC115162202
Chloride intracellular channel protein 5-like.
  
 
 
0.583
CLIC1
Chloride intracellular channel protein 1-like.
  
 
 
0.582
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.