STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000055205LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase. (379 aa)    
Predicted Functional Partners:
ENSSTUP00000002308
Notch receptor 2.
    
 0.868
LOC115199403
Neurogenic locus notch homolog protein 1-like.
    
 0.868
LOC115171254
Neurogenic locus notch homolog protein 2-like.
    
 0.868
LOC115158315
Neurogenic locus notch homolog protein 2-like.
    
 0.868
polr2h
RNA polymerase II subunit H.
    
  0.864
LOC115191205
beta-1,3-N-acetylglucosaminyltransferase manic fringe-like.
  
  
 
0.860
ENSSTUP00000050569
Negative elongation factor complex member B.
   
 0.859
LOC115164714
Negative elongation factor B-like.
   
 0.859
ENSSTUP00000070694
Polymerase (RNA) II (DNA directed) polypeptide I.
    
  0.834
rfng
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
  
  
 
0.813
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.