STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pak5P21 (RAC1) activated kinase 5. (789 aa)    
Predicted Functional Partners:
LOC115150657
Cell division control protein 42 homolog.
   
 0.957
ENSSTUP00000047803
annotation not available
   
 0.957
LOC115165776
Cell division control protein 42 homolog.
   
 0.957
CDC42
Cell division control protein 42 homolog.
   
 0.957
ENSSTUP00000053905
annotation not available
    
 0.953
ENSSTUP00000070599
Intersectin 2b.
    
 0.953
LOC115172947
Rho guanine nucleotide exchange factor 6-like.
    
 0.941
LOC115205288
Rho guanine nucleotide exchange factor 6-like.
    
 0.941
ARHGEF7
Rho guanine nucleotide exchange factor 7-like.
    
 0.940
ENSSTUP00000043944
Rho guanine nucleotide exchange factor (GEF) 7b.
    
 0.940
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.