STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000056527OXA1L mitochondrial inner membrane protein. (476 aa)    
Predicted Functional Partners:
MRPL58
Mitochondrial ribosomal protein L58.
  
 
 0.963
COX2
Cytochrome c oxidase subunit II.
   
 
 0.961
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.958
LOC115150803
Protein transport protein Sec61 subunit alpha.
   
 0.950
SEC61A1
Protein transport protein Sec61 subunit alpha.
   
 0.950
LOC115150543
Protein transport protein Sec61 subunit alpha-like.
   
 0.950
LOC115207623
Protein transport protein Sec61 subunit alpha.
   
 0.950
LOC115182481
39S ribosomal protein L13, mitochondrial-like.
  
 
 0.934
LOC115182481-2
39S ribosomal protein L13, mitochondrial-like.
  
 
 0.934
LOC115162077
Signal recognition particle 54 kDa protein-like.
  
 0.932
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.