STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115196258Probable phospholipid-transporting ATPase IH. (1197 aa)    
Predicted Functional Partners:
nme8
NME/NM23 family member 8.
   
 0.849
LOC115155393
Thioredoxin domain-containing protein 3 homolog.
   
 0.849
ENSSTUP00000007445
Transmembrane protein 30C.
   
 0.814
LOC115161231
Cell cycle control protein 50C-like.
   
 0.814
LOC115162480
Cell cycle control protein 50A-like.
   
 0.814
LOC115174950
Cell cycle control protein 50A-like.
   
 0.814
LOC115172771
Cell cycle control protein 50A-like.
   
 0.814
TMEM30A
Transmembrane protein 30A.
   
 0.814
LOC115172873
Cell cycle control protein 50B-like.
   
 0.800
PLN
Phospholamban.
    
 0.771
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.