STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115174505Actin-related protein 10-like. (417 aa)    
Predicted Functional Partners:
ENSSTUP00000066882
annotation not available
    
 0.997
DCTN6
Dynactin subunit 6.
   
 0.996
DCTN6-2
Dynactin subunit 6-like.
   
 0.996
LOC115166657
Dynactin subunit 4-like.
   
 0.996
LOC115205754
Dynactin subunit 4.
   
 0.996
ENSSTUP00000012473
annotation not available
   
 0.994
ENSSTUP00000012502
annotation not available
   
 0.994
LOC115151077
Dynactin subunit 2-like.
   
 0.994
LOC115194589
Dynactin subunit 1-like.
    
 0.993
ENSSTUP00000021805
Dynactin 1a.
    
 0.993
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.