STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000059774annotation not available (975 aa)    
Predicted Functional Partners:
ENSSTUP00000082882
PYD and CARD domain containing.
   
 0.618
LOC115177037
Apoptosis-associated speck-like protein containing a CARD.
   
 0.618
LOC115156654
Apoptosis-associated speck-like protein containing a CARD.
   
 0.618
ENSSTUP00000001504
annotation not available
   
 0.616
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.597
LOC115192187
Serine/threonine-protein kinase Nek7.
    
 0.590
ENSSTUP00000055300
annotation not available
    
 0.590
LOC115151792
DNA-binding protein RFXANK-like.
    
 0.561
ENSSTUP00000007125
annotation not available
    
  0.559
hsp90ab1
Heat shock protein 90 alpha family class B member 1.
    
  0.559
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.