STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115190616Doublecortin domain-containing protein 2-like. (682 aa)    
Predicted Functional Partners:
pot1
Protection of telomeres 1.
    
 
 0.853
ENSSTUP00000018757
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 
 0.604
LOC115160937
Signal transducing adapter molecule 2-like.
    
 
 0.604
LOC115155602
Signal transducing adapter molecule 2-like.
    
 
 0.604
ENSSTUP00000109522
annotation not available
    
 
 0.604
ENSSTUP00000033411
Melanocortin 1 receptor.
    
   0.503
MC1R
Melanocortin 1 receptor.
    
   0.503
tert
Telomerase reverse transcriptase.
    
 
 0.501
CFAP36
Cilia- and flagella-associated protein 36-like.
   
  
 0.423
CFAP36-2
Cilia- and flagella-associated protein 36-like.
   
  
 0.423
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.