STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000061737annotation not available (685 aa)    
Predicted Functional Partners:
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.940
lss
Lanosterol synthase.
   
 0.934
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
   
 0.878
ENSSTUP00000000256
Hydroxysteroid (17-beta) dehydrogenase 7.
    
 0.876
LOC115156632
3-keto-steroid reductase-like.
    
 0.876
coq5
Coenzyme Q5, methyltransferase.
     
 0.781
ENSSTUP00000028391
annotation not available
   
 0.771
sc5d
sterol-C5-desaturase.
   
 0.771
LOC115193389
Lathosterol oxidase-like.
   
 0.771
LOC115151627
Eukaryotic translation initiation factor 2 subunit 3-like.
  
 0.759
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.