STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000068633Golgin A7 family, member Bb. (167 aa)    
Predicted Functional Partners:
ENSSTUP00000066863
Zinc finger DHHC-type containing 8b.
    
 0.762
LOC115200339
Probable palmitoyltransferase ZDHHC8.
    
 0.762
zdhhc9
Zinc finger DHHC-type containing 9.
    
 0.758
LOC115170160
Palmitoyltransferase ZDHHC9-like.
    
 0.758
LOC115200573
Probable palmitoyltransferase ZDHHC19.
    
 0.722
LOC115171810
Palmitoyltransferase ZDHHC5-like.
    
 0.722
LOC115205194
Palmitoyltransferase ZDHHC5-like.
    
 0.722
ENSSTUP00000079026
Zinc finger DHHC-type containing 5a.
    
 0.722
LOC115191881
Palmitoyltransferase ZDHHC5-like.
    
 0.722
ENSSTUP00000036514
annotation not available
    
 0.719
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.