STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115158258Uncharacterized LOC115158258. (211 aa)    
Predicted Functional Partners:
LOC115195186
Musculin-like.
      
 0.815
LOC115161048
Transcription cofactor vestigial-like protein 3.
      
 0.815
CYTB
Cytochrome b.
      
 0.814
VGLL3
Vestigial like family member 3.
      
 0.801
LOC115206011
Homeobox protein ANF-1-like.
      
 0.712
COX1
Cytochrome c oxidase subunit I.
      
 0.706
MAF
Transcription factor Maf-like.
      
 0.689
ENSSTUP00000081039
Torsin family 1.
      
 0.666
LOC115151737
Megakaryocyte-associated tyrosine-protein kinase-like.
      
 0.648
LOC115158148
Megakaryocyte-associated tyrosine-protein kinase-like.
      
 0.648
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.