STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115175886ATPase family AAA domain-containing protein 2-like. (1246 aa)    
Predicted Functional Partners:
ENSSTUP00000015333
Proteasome 26S subunit, non-ATPase 8.
   
 0.945
LOC115150764
26S proteasome non-ATPase regulatory subunit 6.
   
 0.918
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.918
PSMD12
26S proteasome non-ATPase regulatory subunit 12.
   
 0.911
LOC115178824
26S proteasome non-ATPase regulatory subunit 12-like.
   
 0.911
PSMD2
26S proteasome non-ATPase regulatory subunit 2-like.
   
 0.908
ENSSTUP00000032082
Proteasome 26S subunit, non-ATPase 3.
   
 0.908
PSMD2-2
26S proteasome non-ATPase regulatory subunit 2.
   
 0.908
PSMD3
26S proteasome non-ATPase regulatory subunit 3-like.
   
 0.908
PSMD13
Proteasome 26S subunit, non-ATPase 13.
   
 0.905
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.