STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115153138Myozenin-1-like. (310 aa)    
Predicted Functional Partners:
LOC115168622
Troponin C, skeletal muscle-like.
   
  
 0.876
LOC115165983
Troponin C, skeletal muscle.
   
  
 0.876
ENSSTUP00000000092
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
  
 0.840
ENSSTUP00000023192
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
  
 0.840
LOC115162148
Myosin regulatory light chain 2, skeletal muscle isoform-like.
   
  
 0.840
LOC115168225
AMP deaminase 1-like.
   
  
 0.827
ampd1
Adenosine monophosphate deaminase 1.
   
  
 0.827
ENSSTUP00000085258
Myosin, light chain 1, alkali; skeletal, fast.
   
  
 0.779
LOC115155641
Myosin light chain 1, skeletal muscle isoform-like.
   
  
 0.779
LOC115197627
Telethonin-like.
   
 
 0.775
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.