STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115165596Teashirt homolog 2-like. (1027 aa)    
Predicted Functional Partners:
MEIS1
Meis homeobox 1.
    
 0.586
ENSSTUP00000039493
Meis homeobox 1 b.
    
 0.586
ENSSTUP00000040300
Meis homeobox 2a.
    
 0.586
ENSSTUP00000040362
annotation not available
    
 0.586
meis2
Meis homeobox 2.
    
 0.586
ENSSTUP00000080320
annotation not available
    
 0.586
ENSSTUP00000090005
annotation not available
    
 0.586
LOC115177599
Homeobox protein Meis1.
    
 0.586
ENSSTUP00000114092
Meis homeobox 2a.
    
 0.586
LOC115189005
Iroquois-class homeodomain protein irx-2-like.
    
 0.583
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.