STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115206632Acetyl-coenzyme A transporter 1-like. (545 aa)    
Predicted Functional Partners:
LOC115205223
Malate synthase-like.
  
 0.909
LOC115150577
Beta-1,4 N-acetylgalactosaminyltransferase 1-like.
     
 0.868
ENSSTUP00000038967
beta-1,4-N-acetyl-galactosaminyl transferase 1b.
     
 0.868
LOC115165495
Beta-1,4 N-acetylgalactosaminyltransferase 1-like.
     
 0.866
ENSSTUP00000000158
Cytochrome b5 reductase 4.
    
  0.853
ENSSTUP00000032477
annotation not available
     
 0.853
CYB5R4
Cytochrome b5 reductase 4-like.
    
  0.853
ENSSTUP00000096946
annotation not available
     
 0.853
LOC115198723
dnaJ homolog subfamily B member 9-like.
  
   0.795
LOC115152368
dnaJ homolog subfamily B member 9-like.
  
   0.795
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.