STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000075842Thyroid hormone receptor interactor 12. (2043 aa)    
Predicted Functional Partners:
LOC115195817
Ubiquitin-like modifier-activating enzyme 5.
    
 0.999
LOC115154393
Ubiquitin-like modifier-activating enzyme 5.
    
 0.999
atg7
Autophagy related 7.
    
 0.999
ENSSTUP00000000485
Ubiquitin protein ligase E3 component n-recognin 2.
   
 0.998
ENSSTUP00000034220
Ubiquitin protein ligase E3 component n-recognin 2.
   
 0.998
UBR1
Ubiquitin protein ligase E3 component n-recognin 1.
   
 0.998
UBE2K
Ubiquitin-conjugating enzyme E2 K-like.
   
 0.983
ENSSTUP00000070284
annotation not available
   
 0.983
LOC115173463
Ubiquitin-conjugating enzyme E2 K.
   
 0.983
LOC115205334
Ubiquitin-conjugating enzyme E2 K.
   
 0.983
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.