STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000082673annotation not available (282 aa)    
Predicted Functional Partners:
LOC115157050
APOBEC1 complementation factor-like.
     
 0.846
ENSSTUP00000007807
annotation not available
     
 0.816
LOC115150300
C->U-editing enzyme APOBEC-2-like.
     
 0.816
LOC115208133
C->U-editing enzyme APOBEC-2-like.
     
 0.816
ENSSTUP00000000426
Activation-induced cytidine deaminase.
     
 0.810
LOC115165100
Single-stranded DNA cytosine deaminase-like.
     
 0.810
LOC115167160
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like.
     
 0.616
LOC115203170
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like.
     
 0.616
LOC115150461
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like.
     
 0.616
LOC115168621
Cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like.
     
 0.616
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.