STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000084020annotation not available (750 aa)    
Predicted Functional Partners:
LOC115153309
ubiquitin-40S ribosomal protein S27a-like.
    
  0.865
rps27a
Ribosomal protein S27a.
    
  0.865
ENSSTUP00000056735
annotation not available
    
  0.865
ENSSTUP00000065171
annotation not available
    
  0.865
ENSSTUP00000082743
annotation not available
    
  0.865
ENSSTUP00000088458
Cyclin G associated kinase.
   
  0.842
LOC115192686
Vacuolar protein sorting-associated protein VTA1 homolog.
    
   0.838
LOC115174790
Vacuolar protein sorting-associated protein VTA1 homolog.
    
   0.838
xk
X-linked Kx blood group.
   
 0.837
ENSSTUP00000021574
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
   
 0.837
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.