STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115160984Protein HEG-like. (1295 aa)    
Predicted Functional Partners:
LOC115175796
Krev interaction trapped protein 1-like.
    
 
 0.951
krit1
KRIT1 ankyrin repeat containing.
    
 
 0.951
ENSSTUP00000013622
annotation not available
    
 0.751
ENSSTUP00000013649
annotation not available
    
 0.751
ENSSTUP00000047601
annotation not available
    
 0.751
ENSSTUP00000048962
annotation not available
    
 0.751
ENSSTUP00000049067
annotation not available
    
 0.751
ENSSTUP00000054476
annotation not available
    
 0.751
ENSSTUP00000054748
annotation not available
    
 0.751
LOC115192478
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like.
   
 
 0.720
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.