STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115155623Cofilin-2-like. (164 aa)    
Predicted Functional Partners:
LOC115206291
LIM domain kinase 1-like.
   
 0.971
LOC115163364
LIM domain kinase 1-like.
   
 0.970
LOC115200202
LIM domain kinase 2-like.
   
 0.967
LOC115164436
LIM domain kinase 2-like.
   
 0.967
LOC115171827
Actin, non-muscle 6.2.
   
 0.946
LOC115171827-2
Actin, non-muscle 6.2.
   
 0.946
LOC115188892
Actin, cytoplasmic 1.
   
 0.946
ENSSTUP00000043176
Slingshot protein phosphatase 2a.
    
 0.920
ENSSTUP00000044205
annotation not available
    
 0.920
LOC115173376
Protein phosphatase Slingshot homolog 3-like.
    
 0.920
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.