STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115203713WD repeat-containing protein 88-like. (490 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.885
UNC79-2
Unc-79 homolog, NALCN channel complex subunit.
    
 0.885
RANBP2
RAN binding protein 2.
    
 0.790
ENSSTUP00000027355
annotation not available
    
 0.790
LOC115161061
E3 SUMO-protein ligase RanBP2-like.
    
 0.790
ENSSTUP00000027140
annotation not available
    
 0.758
ENSSTUP00000063902
annotation not available
    
 0.758
ENSSTUP00000041613
annotation not available
    
  0.737
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.737
ENSSTUP00000023803
Adenylate kinase 9.
    
  0.715
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.