STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zhx3Zinc fingers and homeoboxes 3. (1255 aa)    
Predicted Functional Partners:
LOC115206192
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial-like.
    
 0.767
LOC115163245
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit B, mitochondrial-like.
    
 0.767
TIMM22
Mitochondrial import inner membrane translocase subunit Tim22-like.
    
 0.746
LOC115148858
Mitochondrial import inner membrane translocase subunit Tim22-like.
    
 0.746
LOC115169422
Cactin-like.
    
 0.746
LOC115157399
Cactin-like.
    
 0.746
LOC115202080
CDGSH iron-sulfur domain-containing protein 2B.
    
 0.746
LOC115190037
Mitochondrial import inner membrane translocase subunit Tim10.
   
 0.745
LOC115190037-2
Mitochondrial import inner membrane translocase subunit Tim10.
   
 0.745
LOC115169286
Uncharacterized LOC115169286.
   
 
 0.619
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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