STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTUP00000090207Pyruvate dehydrogenase kinase, isozyme 1. (442 aa)    
Predicted Functional Partners:
LOC115153791
annotation not available
    
 0.924
LOC115204710
annotation not available
    
 0.924
ENSSTUP00000044418
annotation not available
    
 0.903
map3k4
Mitogen-activated protein kinase kinase kinase 4.
    
 0.903
ENSSTUP00000003019
Pyruvate dehydrogenase E1 beta subunit.
    
 0.876
pdhb
Pyruvate dehydrogenase E1 beta subunit.
    
 0.876
ENSSTUP00000011173
Pyruvate dehydrogenase complex, component X.
    
 0.873
pdhx
Pyruvate dehydrogenase complex component X.
    
 0.873
ENSSTUP00000019053
annotation not available
     
 0.859
ENSSTUP00000026397
Tenascin C.
     
 0.859
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.